Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Clip4Q8CI96 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Clip4Q8CI96 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clip4Q8CI96 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip4Q8CI96 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Clip4Q8CI96 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip4Q8CI96 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Clip4Q8CI96 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip4Q8CI96 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip4Q8CI96 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clip4Q8CI96 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.17■□□□□ 0.66
Clip4Q8CI96 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Clip4Q8CI96 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Clip4Q8CI96 Gm26833-201ENSMUST00000180899 440 ntBASIC19.17■□□□□ 0.66
Clip4Q8CI96 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.17■□□□□ 0.66
Clip4Q8CI96 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip4Q8CI96 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip4Q8CI96 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip4Q8CI96 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip4Q8CI96 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip4Q8CI96 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip4Q8CI96 Smad6-203ENSMUST00000179458 273 ntBASIC19.16■□□□□ 0.66
Clip4Q8CI96 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip4Q8CI96 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip4Q8CI96 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip4Q8CI96 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip4Q8CI96 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clip4Q8CI96 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip4Q8CI96 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.15■□□□□ 0.66
Clip4Q8CI96 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Clip4Q8CI96 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clip4Q8CI96 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clip4Q8CI96 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clip4Q8CI96 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clip4Q8CI96 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip4Q8CI96 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.14■□□□□ 0.65
Clip4Q8CI96 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip4Q8CI96 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip4Q8CI96 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.13■□□□□ 0.65
Clip4Q8CI96 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip4Q8CI96 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip4Q8CI96 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clip4Q8CI96 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Clip4Q8CI96 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip4Q8CI96 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip4Q8CI96 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Clip4Q8CI96 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms