Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PdgfcQ8CI19 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PdgfcQ8CI19 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfcQ8CI19 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfcQ8CI19 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PdgfcQ8CI19 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfcQ8CI19 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfcQ8CI19 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.19■□□□□ 0.98
PdgfcQ8CI19 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PdgfcQ8CI19 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PdgfcQ8CI19 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfcQ8CI19 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfcQ8CI19 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.18■□□□□ 0.98
PdgfcQ8CI19 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.18■□□□□ 0.98
PdgfcQ8CI19 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfcQ8CI19 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfcQ8CI19 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.18■□□□□ 0.98
PdgfcQ8CI19 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PdgfcQ8CI19 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PdgfcQ8CI19 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfcQ8CI19 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfcQ8CI19 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PdgfcQ8CI19 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfcQ8CI19 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PdgfcQ8CI19 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PdgfcQ8CI19 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PdgfcQ8CI19 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PdgfcQ8CI19 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfcQ8CI19 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfcQ8CI19 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.15■□□□□ 0.98
PdgfcQ8CI19 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfcQ8CI19 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PdgfcQ8CI19 Gm12896-201ENSMUST00000118430 226 ntBASIC21.15■□□□□ 0.98
PdgfcQ8CI19 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfcQ8CI19 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.15■□□□□ 0.98
PdgfcQ8CI19 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PdgfcQ8CI19 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PdgfcQ8CI19 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
PdgfcQ8CI19 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PdgfcQ8CI19 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PdgfcQ8CI19 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfcQ8CI19 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfcQ8CI19 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfcQ8CI19 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfcQ8CI19 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PdgfcQ8CI19 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfcQ8CI19 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfcQ8CI19 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.13■□□□□ 0.97
PdgfcQ8CI19 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfcQ8CI19 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfcQ8CI19 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PdgfcQ8CI19 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfcQ8CI19 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfcQ8CI19 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.11■□□□□ 0.97
PdgfcQ8CI19 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PdgfcQ8CI19 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PdgfcQ8CI19 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms