Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.55■■□□□ 1.04
Trim32Q8CH72 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim32Q8CH72 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Trim32Q8CH72 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.55■■□□□ 1.04
Trim32Q8CH72 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim32Q8CH72 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Trim32Q8CH72 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Trim32Q8CH72 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim32Q8CH72 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim32Q8CH72 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim32Q8CH72 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim32Q8CH72 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim32Q8CH72 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim32Q8CH72 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim32Q8CH72 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim32Q8CH72 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim32Q8CH72 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim32Q8CH72 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim32Q8CH72 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim32Q8CH72 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Trim32Q8CH72 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim32Q8CH72 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.53■■□□□ 1.04
Trim32Q8CH72 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.53■■□□□ 1.04
Trim32Q8CH72 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim32Q8CH72 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim32Q8CH72 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim32Q8CH72 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim32Q8CH72 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim32Q8CH72 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim32Q8CH72 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim32Q8CH72 Gm12896-201ENSMUST00000118430 226 ntBASIC21.52■■□□□ 1.04
Trim32Q8CH72 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim32Q8CH72 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim32Q8CH72 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim32Q8CH72 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim32Q8CH72 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim32Q8CH72 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim32Q8CH72 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim32Q8CH72 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
Trim32Q8CH72 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim32Q8CH72 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim32Q8CH72 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim32Q8CH72 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim32Q8CH72 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim32Q8CH72 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim32Q8CH72 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim32Q8CH72 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim32Q8CH72 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim32Q8CH72 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim32Q8CH72 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim32Q8CH72 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.5■■□□□ 1.03
Trim32Q8CH72 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim32Q8CH72 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim32Q8CH72 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.49■■□□□ 1.03
Trim32Q8CH72 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.49■■□□□ 1.03
Trim32Q8CH72 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.49■■□□□ 1.03
Trim32Q8CH72 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim32Q8CH72 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trim32Q8CH72 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trim32Q8CH72 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.49■■□□□ 1.03
Trim32Q8CH72 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.48■■□□□ 1.03
Trim32Q8CH72 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim32Q8CH72 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Trim32Q8CH72 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim32Q8CH72 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim32Q8CH72 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim32Q8CH72 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim32Q8CH72 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.48■■□□□ 1.03
Trim32Q8CH72 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim32Q8CH72 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim32Q8CH72 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim32Q8CH72 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim32Q8CH72 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim32Q8CH72 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Trim32Q8CH72 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Trim32Q8CH72 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trim32Q8CH72 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim32Q8CH72 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim32Q8CH72 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim32Q8CH72 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.46■■□□□ 1.03
Trim32Q8CH72 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim32Q8CH72 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.45■■□□□ 1.02
Trim32Q8CH72 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim32Q8CH72 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Trim32Q8CH72 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim32Q8CH72 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim32Q8CH72 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim32Q8CH72 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trim32Q8CH72 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trim32Q8CH72 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms