Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Gm12922-201ENSMUST00000120626 809 ntBASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox30Q8CGW4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox30Q8CGW4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Sox30Q8CGW4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Sox30Q8CGW4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sox30Q8CGW4 Gm45102-201ENSMUST00000207427 857 ntBASIC21■□□□□ 0.95
Sox30Q8CGW4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21■□□□□ 0.95
Sox30Q8CGW4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox30Q8CGW4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox30Q8CGW4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox30Q8CGW4 Gm43213-201ENSMUST00000151866 1790 ntBASIC21■□□□□ 0.95
Sox30Q8CGW4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox30Q8CGW4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21■□□□□ 0.95
Sox30Q8CGW4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sox30Q8CGW4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.99■□□□□ 0.95
Sox30Q8CGW4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sox30Q8CGW4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox30Q8CGW4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox30Q8CGW4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sox30Q8CGW4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox30Q8CGW4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox30Q8CGW4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox30Q8CGW4 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sox30Q8CGW4 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sox30Q8CGW4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Sox30Q8CGW4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Sox30Q8CGW4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sox30Q8CGW4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms