Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28bQ8CEG5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc28bQ8CEG5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc28bQ8CEG5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ccdc28bQ8CEG5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28bQ8CEG5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28bQ8CEG5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28bQ8CEG5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28bQ8CEG5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28bQ8CEG5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Etf1-202ENSMUST00000180351 108 ntBASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28bQ8CEG5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc28bQ8CEG5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc28bQ8CEG5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ccdc28bQ8CEG5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc28bQ8CEG5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.83■□□□□ 0.61
Ccdc28bQ8CEG5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc28bQ8CEG5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc28bQ8CEG5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc28bQ8CEG5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms