Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Fam228aQ8CDW1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fam228aQ8CDW1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Fam228aQ8CDW1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fam228aQ8CDW1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fam228aQ8CDW1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fam228aQ8CDW1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Fam228aQ8CDW1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
Fam228aQ8CDW1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fam228aQ8CDW1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Fam228aQ8CDW1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam228aQ8CDW1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam228aQ8CDW1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam228aQ8CDW1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam228aQ8CDW1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam228aQ8CDW1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Fam228aQ8CDW1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam228aQ8CDW1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam228aQ8CDW1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam228aQ8CDW1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam228aQ8CDW1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Fam228aQ8CDW1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Fam228aQ8CDW1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Fam228aQ8CDW1 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.02■□□□□ 0.79
Fam228aQ8CDW1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Fam228aQ8CDW1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fam228aQ8CDW1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fam228aQ8CDW1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
Fam228aQ8CDW1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fam228aQ8CDW1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fam228aQ8CDW1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20■□□□□ 0.79
Fam228aQ8CDW1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam228aQ8CDW1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam228aQ8CDW1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam228aQ8CDW1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam228aQ8CDW1 Gm32699-201ENSMUST00000221728 1988 ntBASIC20■□□□□ 0.79
Fam228aQ8CDW1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20■□□□□ 0.79
Fam228aQ8CDW1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam228aQ8CDW1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam228aQ8CDW1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam228aQ8CDW1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam228aQ8CDW1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam228aQ8CDW1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms