Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf170Q8CBG9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf170Q8CBG9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.14■□□□□ 0.18
Rnf170Q8CBG9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rnf170Q8CBG9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf170Q8CBG9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Gm13241-201ENSMUST00000094493 780 ntBASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf170Q8CBG9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf170Q8CBG9 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf170Q8CBG9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf170Q8CBG9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf170Q8CBG9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms