Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Gm10493-201ENSMUST00000097270 612 ntBASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp44Q8C2S0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.51■■□□□ 1.19
Usp44Q8C2S0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp44Q8C2S0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp44Q8C2S0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp44Q8C2S0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp44Q8C2S0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Usp44Q8C2S0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp44Q8C2S0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp44Q8C2S0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp44Q8C2S0 Reep4-203ENSMUST00000226563 1444 ntBASIC22.48■■□□□ 1.19
Usp44Q8C2S0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp44Q8C2S0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp44Q8C2S0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp44Q8C2S0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp44Q8C2S0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp44Q8C2S0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp44Q8C2S0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
Usp44Q8C2S0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp44Q8C2S0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Gm9988-201ENSMUST00000069786 435 ntBASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp44Q8C2S0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Gm13146-201ENSMUST00000118508 780 ntBASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Usp44Q8C2S0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Usp44Q8C2S0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Usp44Q8C2S0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
Usp44Q8C2S0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.45■■□□□ 1.18
Usp44Q8C2S0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp44Q8C2S0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp44Q8C2S0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp44Q8C2S0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp44Q8C2S0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp44Q8C2S0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp44Q8C2S0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp44Q8C2S0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Usp44Q8C2S0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms