Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne1Q8C166 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne1Q8C166 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpne1Q8C166 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpne1Q8C166 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpne1Q8C166 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpne1Q8C166 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpne1Q8C166 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Cpne1Q8C166 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.83■□□□□ 0.44
Cpne1Q8C166 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.83■□□□□ 0.44
Cpne1Q8C166 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cpne1Q8C166 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne1Q8C166 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne1Q8C166 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.82■□□□□ 0.44
Cpne1Q8C166 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne1Q8C166 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne1Q8C166 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.82■□□□□ 0.44
Cpne1Q8C166 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cpne1Q8C166 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.82■□□□□ 0.44
Cpne1Q8C166 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne1Q8C166 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne1Q8C166 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne1Q8C166 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.82■□□□□ 0.44
Cpne1Q8C166 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne1Q8C166 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne1Q8C166 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cpne1Q8C166 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.79■□□□□ 0.44
Cpne1Q8C166 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne1Q8C166 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.79■□□□□ 0.44
Cpne1Q8C166 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne1Q8C166 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne1Q8C166 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne1Q8C166 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne1Q8C166 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne1Q8C166 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cpne1Q8C166 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne1Q8C166 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.79■□□□□ 0.44
Cpne1Q8C166 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne1Q8C166 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne1Q8C166 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne1Q8C166 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne1Q8C166 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms