Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smco3Q8BQM7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Smco3Q8BQM7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Smco3Q8BQM7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smco3Q8BQM7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smco3Q8BQM7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Smco3Q8BQM7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smco3Q8BQM7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Smco3Q8BQM7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smco3Q8BQM7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms