Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc3Q8BPK2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Gm11421-201ENSMUST00000122124 294 ntBASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Smad6-203ENSMUST00000179458 273 ntBASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Gm43173-201ENSMUST00000202246 593 ntBASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zcchc3Q8BPK2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Gm45417-201ENSMUST00000209533 758 ntBASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Zcchc3Q8BPK2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zcchc3Q8BPK2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Zcchc3Q8BPK2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Zcchc3Q8BPK2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Gm6139-201ENSMUST00000079261 882 ntBASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc3Q8BPK2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zcchc3Q8BPK2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zcchc3Q8BPK2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms