Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf18Q8BM39 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Gm45102-201ENSMUST00000207427 857 ntBASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf18Q8BM39 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf18Q8BM39 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf18Q8BM39 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf18Q8BM39 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Prpf18Q8BM39 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Prpf18Q8BM39 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf18Q8BM39 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
Prpf18Q8BM39 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Prpf18Q8BM39 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf18Q8BM39 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf18Q8BM39 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf18Q8BM39 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf18Q8BM39 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf18Q8BM39 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf18Q8BM39 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf18Q8BM39 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf18Q8BM39 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.08■□□□□ 0.48
Prpf18Q8BM39 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.08■□□□□ 0.48
Prpf18Q8BM39 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.08■□□□□ 0.48
Prpf18Q8BM39 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf18Q8BM39 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Prpf18Q8BM39 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf18Q8BM39 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf18Q8BM39 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.08■□□□□ 0.48
Prpf18Q8BM39 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Mir6236-201ENSMUST00000184437 123 ntBASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf18Q8BM39 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Gm43530-201ENSMUST00000195920 274 ntBASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf18Q8BM39 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms