Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC25.49■■□□□ 1.67
Col16a1Q8BLX7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
Col16a1Q8BLX7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC25.49■■□□□ 1.67
Col16a1Q8BLX7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Col16a1Q8BLX7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Col16a1Q8BLX7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Col16a1Q8BLX7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col16a1Q8BLX7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Col16a1Q8BLX7 Gm10698-201ENSMUST00000182663 604 ntBASIC25.48■■□□□ 1.67
Col16a1Q8BLX7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col16a1Q8BLX7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col16a1Q8BLX7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC25.48■■□□□ 1.67
Col16a1Q8BLX7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Col16a1Q8BLX7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col16a1Q8BLX7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Gm20100-201ENSMUST00000209418 2272 ntBASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Gm2559-201ENSMUST00000201323 363 ntBASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col16a1Q8BLX7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col16a1Q8BLX7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC25.46■■□□□ 1.67
Col16a1Q8BLX7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Col16a1Q8BLX7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col16a1Q8BLX7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Col16a1Q8BLX7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col16a1Q8BLX7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col16a1Q8BLX7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Col16a1Q8BLX7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Col16a1Q8BLX7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Col16a1Q8BLX7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 Arhgef33-211ENSMUST00000225658 473 ntBASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 Gm9484-201ENSMUST00000195892 1159 ntBASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 AL672049.1-201ENSMUST00000197943 91 ntBASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col16a1Q8BLX7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col16a1Q8BLX7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col16a1Q8BLX7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Col16a1Q8BLX7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col16a1Q8BLX7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col16a1Q8BLX7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC25.43■■□□□ 1.66
Col16a1Q8BLX7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col16a1Q8BLX7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
Col16a1Q8BLX7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col16a1Q8BLX7 AC153881.1-201ENSMUST00000214448 284 ntBASIC25.42■■□□□ 1.66
Col16a1Q8BLX7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Col16a1Q8BLX7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col16a1Q8BLX7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Col16a1Q8BLX7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 Gm11249-201ENSMUST00000117071 859 ntBASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col16a1Q8BLX7 Gm15565-201ENSMUST00000118890 427 ntBASIC25.4■■□□□ 1.66
Col16a1Q8BLX7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
Col16a1Q8BLX7 Gm26971-201ENSMUST00000182423 1072 ntBASIC25.4■■□□□ 1.66
Col16a1Q8BLX7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col16a1Q8BLX7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Col16a1Q8BLX7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Col16a1Q8BLX7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC25.39■■□□□ 1.66
Col16a1Q8BLX7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Col16a1Q8BLX7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Col16a1Q8BLX7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Col16a1Q8BLX7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
Col16a1Q8BLX7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Col16a1Q8BLX7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Col16a1Q8BLX7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col16a1Q8BLX7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col16a1Q8BLX7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms