Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcal1Q8BJL0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Smarcal1Q8BJL0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcal1Q8BJL0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.41■□□□□ 0.86
Smarcal1Q8BJL0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smarcal1Q8BJL0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcal1Q8BJL0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Smarcal1Q8BJL0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcal1Q8BJL0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcal1Q8BJL0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smarcal1Q8BJL0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcal1Q8BJL0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcal1Q8BJL0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcal1Q8BJL0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarcal1Q8BJL0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarcal1Q8BJL0 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcal1Q8BJL0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Trmt13-210ENSMUST00000198454 880 ntBASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Smarcal1Q8BJL0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcal1Q8BJL0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Gm10252-201ENSMUST00000209541 832 ntBASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcal1Q8BJL0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smarcal1Q8BJL0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.34■□□□□ 0.85
Smarcal1Q8BJL0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcal1Q8BJL0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcal1Q8BJL0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smarcal1Q8BJL0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcal1Q8BJL0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms