Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chmp2bQ8BJF9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2bQ8BJF9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.5■□□□□ 0.71
Chmp2bQ8BJF9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.5■□□□□ 0.71
Chmp2bQ8BJF9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2bQ8BJF9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2bQ8BJF9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 Serp2-204ENSMUST00000228055 705 ntBASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2bQ8BJF9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2bQ8BJF9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2bQ8BJF9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.46■□□□□ 0.71
Chmp2bQ8BJF9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.46■□□□□ 0.71
Chmp2bQ8BJF9 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.46■□□□□ 0.71
Chmp2bQ8BJF9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2bQ8BJF9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2bQ8BJF9 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chmp2bQ8BJF9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp2bQ8BJF9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2bQ8BJF9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chmp2bQ8BJF9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2bQ8BJF9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2bQ8BJF9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Chmp2bQ8BJF9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp2bQ8BJF9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chmp2bQ8BJF9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp2bQ8BJF9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms