Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 AA386476-201ENSMUST00000098781 1665 ntBASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Gm43530-201ENSMUST00000195920 274 ntBASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn3bQ8BHK2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Scn3bQ8BHK2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn3bQ8BHK2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Scn3bQ8BHK2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Scn3bQ8BHK2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn3bQ8BHK2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn3bQ8BHK2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn3bQ8BHK2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn3bQ8BHK2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn3bQ8BHK2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.74■□□□□ 0.43
Scn3bQ8BHK2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms