Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc5a7Q8BGY9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.77■□□□□ 0.28
Slc5a7Q8BGY9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc5a7Q8BGY9 Gm11175-201ENSMUST00000116172 543 ntBASIC16.77■□□□□ 0.28
Slc5a7Q8BGY9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc5a7Q8BGY9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc5a7Q8BGY9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Slc5a7Q8BGY9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc5a7Q8BGY9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Slc5a7Q8BGY9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc5a7Q8BGY9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc5a7Q8BGY9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc5a7Q8BGY9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc5a7Q8BGY9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc5a7Q8BGY9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc5a7Q8BGY9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.75■□□□□ 0.27
Slc5a7Q8BGY9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
Slc5a7Q8BGY9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.75■□□□□ 0.27
Slc5a7Q8BGY9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc5a7Q8BGY9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Slc5a7Q8BGY9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc5a7Q8BGY9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc5a7Q8BGY9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc5a7Q8BGY9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc5a7Q8BGY9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc5a7Q8BGY9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Slc5a7Q8BGY9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.74■□□□□ 0.27
Slc5a7Q8BGY9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.74■□□□□ 0.27
Slc5a7Q8BGY9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc5a7Q8BGY9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc5a7Q8BGY9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Slc5a7Q8BGY9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Slc5a7Q8BGY9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.74■□□□□ 0.27
Slc5a7Q8BGY9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Gm45444-201ENSMUST00000211394 898 ntBASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc5a7Q8BGY9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Gm43530-201ENSMUST00000195920 274 ntBASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc5a7Q8BGY9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc5a7Q8BGY9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Slc5a7Q8BGY9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms