Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npas4Q8BGD7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Npas4Q8BGD7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npas4Q8BGD7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Npas4Q8BGD7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Npas4Q8BGD7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
Npas4Q8BGD7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npas4Q8BGD7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Npas4Q8BGD7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.27■□□□□ 0.84
Npas4Q8BGD7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Npas4Q8BGD7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npas4Q8BGD7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Npas4Q8BGD7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npas4Q8BGD7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.26■□□□□ 0.83
Npas4Q8BGD7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npas4Q8BGD7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npas4Q8BGD7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Npas4Q8BGD7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Npas4Q8BGD7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Npas4Q8BGD7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.25■□□□□ 0.83
Npas4Q8BGD7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npas4Q8BGD7 Gm27275-201ENSMUST00000184318 272 ntBASIC20.25■□□□□ 0.83
Npas4Q8BGD7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.25■□□□□ 0.83
Npas4Q8BGD7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Npas4Q8BGD7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npas4Q8BGD7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.25■□□□□ 0.83
Npas4Q8BGD7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Npas4Q8BGD7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npas4Q8BGD7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.24■□□□□ 0.83
Npas4Q8BGD7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Npas4Q8BGD7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npas4Q8BGD7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npas4Q8BGD7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Npas4Q8BGD7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Gm12896-201ENSMUST00000118430 226 ntBASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npas4Q8BGD7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npas4Q8BGD7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Npas4Q8BGD7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Npas4Q8BGD7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.2■□□□□ 0.82
Npas4Q8BGD7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Npas4Q8BGD7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Npas4Q8BGD7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms