Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Gm43060-201ENSMUST00000200621 289 ntBASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim65Q8BFW4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim65Q8BFW4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim65Q8BFW4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim65Q8BFW4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim65Q8BFW4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim65Q8BFW4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim65Q8BFW4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim65Q8BFW4 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.45■□□□□ 0.86
Trim65Q8BFW4 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.45■□□□□ 0.86
Trim65Q8BFW4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim65Q8BFW4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim65Q8BFW4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Trim65Q8BFW4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim65Q8BFW4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim65Q8BFW4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim65Q8BFW4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim65Q8BFW4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim65Q8BFW4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim65Q8BFW4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim65Q8BFW4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim65Q8BFW4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim65Q8BFW4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim65Q8BFW4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim65Q8BFW4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms