Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.46■□□□□ 0.39
Zc3hc1Q80YV2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3hc1Q80YV2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3hc1Q80YV2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3hc1Q80YV2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3hc1Q80YV2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Zc3hc1Q80YV2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3hc1Q80YV2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3hc1Q80YV2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3hc1Q80YV2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Zc3hc1Q80YV2 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.41■□□□□ 0.38
Zc3hc1Q80YV2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3hc1Q80YV2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.41■□□□□ 0.38
Zc3hc1Q80YV2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.41■□□□□ 0.38
Zc3hc1Q80YV2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3hc1Q80YV2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3hc1Q80YV2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3hc1Q80YV2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3hc1Q80YV2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3hc1Q80YV2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Zc3hc1Q80YV2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3hc1Q80YV2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3hc1Q80YV2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3hc1Q80YV2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3hc1Q80YV2 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.39■□□□□ 0.37
Zc3hc1Q80YV2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3hc1Q80YV2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3hc1Q80YV2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.39■□□□□ 0.37
Zc3hc1Q80YV2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3hc1Q80YV2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3hc1Q80YV2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3hc1Q80YV2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3hc1Q80YV2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Zc3hc1Q80YV2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms