Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Skida1Q80YR3 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.76■□□□□ 0.59
Skida1Q80YR3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Skida1Q80YR3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Gm12933-201ENSMUST00000120203 872 ntBASIC18.75■□□□□ 0.59
Skida1Q80YR3 AC154616.1-201ENSMUST00000226995 804 ntBASIC18.75■□□□□ 0.59
Skida1Q80YR3 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Skida1Q80YR3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Gm3344-201ENSMUST00000169610 603 ntBASIC18.74■□□□□ 0.59
Skida1Q80YR3 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Skida1Q80YR3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Skida1Q80YR3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Skida1Q80YR3 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Skida1Q80YR3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Skida1Q80YR3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.72■□□□□ 0.59
Skida1Q80YR3 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Skida1Q80YR3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Skida1Q80YR3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Skida1Q80YR3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Skida1Q80YR3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Skida1Q80YR3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Skida1Q80YR3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Skida1Q80YR3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Gm9988-201ENSMUST00000069786 435 ntBASIC18.71■□□□□ 0.59
Skida1Q80YR3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Skida1Q80YR3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Gm8312-201ENSMUST00000119380 618 ntBASIC18.7■□□□□ 0.58
Skida1Q80YR3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Skida1Q80YR3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms