Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nucks1Q80XU3 Gm12251-201ENSMUST00000117893 792 ntBASIC20.41■□□□□ 0.86
Nucks1Q80XU3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nucks1Q80XU3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nucks1Q80XU3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nucks1Q80XU3 Golph3-205ENSMUST00000228671 2842 ntBASIC20.41■□□□□ 0.86
Nucks1Q80XU3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nucks1Q80XU3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nucks1Q80XU3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nucks1Q80XU3 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.39■□□□□ 0.86
Nucks1Q80XU3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nucks1Q80XU3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Nucks1Q80XU3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nucks1Q80XU3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nucks1Q80XU3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nucks1Q80XU3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Nucks1Q80XU3 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Gm21956-201ENSMUST00000179946 522 ntBASIC20.38■□□□□ 0.85
Nucks1Q80XU3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nucks1Q80XU3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nucks1Q80XU3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nucks1Q80XU3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nucks1Q80XU3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.37■□□□□ 0.85
Nucks1Q80XU3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
Nucks1Q80XU3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nucks1Q80XU3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nucks1Q80XU3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nucks1Q80XU3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nucks1Q80XU3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nucks1Q80XU3 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nucks1Q80XU3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms