Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3tc2Q80VA5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3tc2Q80VA5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Sh3tc2Q80VA5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Sh3tc2Q80VA5 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.83■□□□□ 0.93
Sh3tc2Q80VA5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.83■□□□□ 0.93
Sh3tc2Q80VA5 Gm20049-201ENSMUST00000219950 730 ntBASIC20.83■□□□□ 0.93
Sh3tc2Q80VA5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Sh3tc2Q80VA5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sh3tc2Q80VA5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sh3tc2Q80VA5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sh3tc2Q80VA5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.82■□□□□ 0.92
Sh3tc2Q80VA5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3tc2Q80VA5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Sh3tc2Q80VA5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3tc2Q80VA5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3tc2Q80VA5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.8■□□□□ 0.92
Sh3tc2Q80VA5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.8■□□□□ 0.92
Sh3tc2Q80VA5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3tc2Q80VA5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3tc2Q80VA5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3tc2Q80VA5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Gm22325-201ENSMUST00000158904 308 ntBASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3tc2Q80VA5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Gm10812-201ENSMUST00000099864 546 ntBASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3tc2Q80VA5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3tc2Q80VA5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sh3tc2Q80VA5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Sh3tc2Q80VA5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3tc2Q80VA5 Gm37856-201ENSMUST00000191634 999 ntBASIC20.76■□□□□ 0.91
Sh3tc2Q80VA5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.76■□□□□ 0.91
Sh3tc2Q80VA5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3tc2Q80VA5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3tc2Q80VA5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3tc2Q80VA5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3tc2Q80VA5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms