Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp38Q80UU2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpp38Q80UU2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpp38Q80UU2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpp38Q80UU2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp38Q80UU2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rpp38Q80UU2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rpp38Q80UU2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp38Q80UU2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rpp38Q80UU2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.12■□□□□ 0.65
Rpp38Q80UU2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp38Q80UU2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp38Q80UU2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp38Q80UU2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Gm38205-201ENSMUST00000192243 258 ntBASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp38Q80UU2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp38Q80UU2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp38Q80UU2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp38Q80UU2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp38Q80UU2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp38Q80UU2 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.09■□□□□ 0.65
Rpp38Q80UU2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.09■□□□□ 0.65
Rpp38Q80UU2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms