Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.12■□□□□ 0.97
Kdm1aQ6ZQ88 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Kdm1aQ6ZQ88 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.12■□□□□ 0.97
Kdm1aQ6ZQ88 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm1aQ6ZQ88 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm1aQ6ZQ88 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm1aQ6ZQ88 Golph3-205ENSMUST00000228671 2842 ntBASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Smad6-203ENSMUST00000179458 273 ntBASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm1aQ6ZQ88 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Gm8493-201ENSMUST00000196881 489 ntBASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm1aQ6ZQ88 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Kdm1aQ6ZQ88 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Kdm1aQ6ZQ88 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Kdm1aQ6ZQ88 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Kdm1aQ6ZQ88 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Kdm1aQ6ZQ88 Gm27454-201ENSMUST00000185090 204 ntBASIC21.08■□□□□ 0.97
Kdm1aQ6ZQ88 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Kdm1aQ6ZQ88 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Kdm1aQ6ZQ88 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Kdm1aQ6ZQ88 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Kdm1aQ6ZQ88 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Kdm1aQ6ZQ88 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Kdm1aQ6ZQ88 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Kdm1aQ6ZQ88 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Gm11421-201ENSMUST00000122124 294 ntBASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Gm43173-201ENSMUST00000202246 593 ntBASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Kdm1aQ6ZQ88 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Kdm1aQ6ZQ88 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kdm1aQ6ZQ88 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Kdm1aQ6ZQ88 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kdm1aQ6ZQ88 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.06■□□□□ 0.96
Kdm1aQ6ZQ88 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Kdm1aQ6ZQ88 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Kdm1aQ6ZQ88 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kdm1aQ6ZQ88 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Kdm1aQ6ZQ88 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kdm1aQ6ZQ88 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms