Protein–RNA interactions for Protein: Q61999

Odf1, Outer dense fiber protein 1, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf1Q61999 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Odf1Q61999 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Odf1Q61999 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Odf1Q61999 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Odf1Q61999 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Odf1Q61999 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.33□□□□□ -0.12
Odf1Q61999 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.33□□□□□ -0.12
Odf1Q61999 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.33□□□□□ -0.12
Odf1Q61999 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.33□□□□□ -0.12
Odf1Q61999 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Odf1Q61999 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.32□□□□□ -0.12
Odf1Q61999 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.32□□□□□ -0.12
Odf1Q61999 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.32□□□□□ -0.12
Odf1Q61999 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Odf1Q61999 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Odf1Q61999 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Odf1Q61999 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Odf1Q61999 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.31□□□□□ -0.12
Odf1Q61999 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Odf1Q61999 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.31□□□□□ -0.12
Odf1Q61999 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Odf1Q61999 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.31□□□□□ -0.12
Odf1Q61999 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Odf1Q61999 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.31□□□□□ -0.12
Odf1Q61999 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.31□□□□□ -0.12
Odf1Q61999 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Odf1Q61999 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Odf1Q61999 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Odf1Q61999 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Odf1Q61999 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Odf1Q61999 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Odf1Q61999 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.3□□□□□ -0.12
Odf1Q61999 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Odf1Q61999 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Odf1Q61999 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Odf1Q61999 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Odf1Q61999 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Odf1Q61999 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Odf1Q61999 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Odf1Q61999 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.29□□□□□ -0.12
Odf1Q61999 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Odf1Q61999 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.29□□□□□ -0.12
Odf1Q61999 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Odf1Q61999 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms