Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
Sox17Q61473 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sox17Q61473 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox17Q61473 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Sox17Q61473 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox17Q61473 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sox17Q61473 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.93■□□□□ 0.46
Sox17Q61473 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.93■□□□□ 0.46
Sox17Q61473 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.93■□□□□ 0.46
Sox17Q61473 Gm9870-201ENSMUST00000063874 645 ntBASIC17.93■□□□□ 0.46
Sox17Q61473 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Sox17Q61473 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox17Q61473 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sox17Q61473 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.92■□□□□ 0.46
Sox17Q61473 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.92■□□□□ 0.46
Sox17Q61473 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.92■□□□□ 0.46
Sox17Q61473 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sox17Q61473 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox17Q61473 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.92■□□□□ 0.46
Sox17Q61473 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.92■□□□□ 0.46
Sox17Q61473 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sox17Q61473 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.91■□□□□ 0.46
Sox17Q61473 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sox17Q61473 Etf1-202ENSMUST00000180351 108 ntBASIC17.91■□□□□ 0.46
Sox17Q61473 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sox17Q61473 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox17Q61473 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Sox17Q61473 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox17Q61473 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox17Q61473 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.9■□□□□ 0.46
Sox17Q61473 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Sox17Q61473 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.9■□□□□ 0.46
Sox17Q61473 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Sox17Q61473 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sox17Q61473 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.9■□□□□ 0.46
Sox17Q61473 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sox17Q61473 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox17Q61473 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Sox17Q61473 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
Sox17Q61473 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sox17Q61473 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox17Q61473 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox17Q61473 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox17Q61473 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox17Q61473 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sox17Q61473 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox17Q61473 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox17Q61473 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Sox17Q61473 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox17Q61473 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sox17Q61473 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox17Q61473 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.88■□□□□ 0.45
Sox17Q61473 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox17Q61473 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox17Q61473 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox17Q61473 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox17Q61473 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sox17Q61473 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sox17Q61473 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox17Q61473 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox17Q61473 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox17Q61473 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox17Q61473 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms