Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six4Q61321 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Six4Q61321 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six4Q61321 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.37■□□□□ 0.69
Six4Q61321 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.37■□□□□ 0.69
Six4Q61321 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Six4Q61321 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Six4Q61321 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six4Q61321 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Six4Q61321 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.36■□□□□ 0.69
Six4Q61321 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.36■□□□□ 0.69
Six4Q61321 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.36■□□□□ 0.69
Six4Q61321 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six4Q61321 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six4Q61321 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six4Q61321 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six4Q61321 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six4Q61321 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six4Q61321 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.35■□□□□ 0.69
Six4Q61321 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six4Q61321 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.35■□□□□ 0.69
Six4Q61321 Gm18284-201ENSMUST00000172604 624 ntBASIC19.35■□□□□ 0.69
Six4Q61321 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six4Q61321 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six4Q61321 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six4Q61321 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Six4Q61321 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.34■□□□□ 0.69
Six4Q61321 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Six4Q61321 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Six4Q61321 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Six4Q61321 Iqck-206ENSMUST00000208658 2891 ntBASIC19.33■□□□□ 0.69
Six4Q61321 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Six4Q61321 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six4Q61321 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six4Q61321 Gm5874-201ENSMUST00000096101 508 ntBASIC19.33■□□□□ 0.68
Six4Q61321 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six4Q61321 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six4Q61321 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Six4Q61321 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six4Q61321 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six4Q61321 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six4Q61321 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six4Q61321 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six4Q61321 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six4Q61321 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six4Q61321 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.3■□□□□ 0.68
Six4Q61321 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.3■□□□□ 0.68
Six4Q61321 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.3■□□□□ 0.68
Six4Q61321 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six4Q61321 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six4Q61321 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six4Q61321 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
Six4Q61321 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Six4Q61321 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.29■□□□□ 0.68
Six4Q61321 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six4Q61321 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Six4Q61321 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Six4Q61321 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.29■□□□□ 0.68
Six4Q61321 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six4Q61321 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Six4Q61321 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Six4Q61321 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six4Q61321 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six4Q61321 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six4Q61321 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six4Q61321 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six4Q61321 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six4Q61321 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six4Q61321 Gm13234-201ENSMUST00000120010 747 ntBASIC19.28■□□□□ 0.68
Six4Q61321 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Six4Q61321 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six4Q61321 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.28■□□□□ 0.68
Six4Q61321 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Six4Q61321 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six4Q61321 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six4Q61321 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Six4Q61321 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Six4Q61321 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Six4Q61321 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.27■□□□□ 0.68
Six4Q61321 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six4Q61321 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.27■□□□□ 0.68
Six4Q61321 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms