Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col12a1Q60847 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.23■□□□□ 0.67
Col12a1Q60847 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col12a1Q60847 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.23■□□□□ 0.67
Col12a1Q60847 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col12a1Q60847 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col12a1Q60847 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.23■□□□□ 0.67
Col12a1Q60847 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col12a1Q60847 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Col12a1Q60847 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.23■□□□□ 0.67
Col12a1Q60847 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col12a1Q60847 Gm5417-201ENSMUST00000079706 384 ntBASIC19.23■□□□□ 0.67
Col12a1Q60847 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col12a1Q60847 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col12a1Q60847 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col12a1Q60847 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Col12a1Q60847 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Col12a1Q60847 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Col12a1Q60847 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col12a1Q60847 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Col12a1Q60847 Gm2399-201ENSMUST00000104944 225 ntBASIC19.21■□□□□ 0.67
Col12a1Q60847 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col12a1Q60847 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.21■□□□□ 0.67
Col12a1Q60847 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.21■□□□□ 0.67
Col12a1Q60847 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Col12a1Q60847 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col12a1Q60847 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.21■□□□□ 0.67
Col12a1Q60847 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.21■□□□□ 0.67
Col12a1Q60847 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.21■□□□□ 0.67
Col12a1Q60847 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col12a1Q60847 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Col12a1Q60847 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.2■□□□□ 0.66
Col12a1Q60847 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.2■□□□□ 0.66
Col12a1Q60847 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col12a1Q60847 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col12a1Q60847 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.2■□□□□ 0.66
Col12a1Q60847 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col12a1Q60847 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col12a1Q60847 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col12a1Q60847 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col12a1Q60847 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col12a1Q60847 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col12a1Q60847 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col12a1Q60847 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col12a1Q60847 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col12a1Q60847 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.19■□□□□ 0.66
Col12a1Q60847 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col12a1Q60847 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col12a1Q60847 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col12a1Q60847 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col12a1Q60847 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col12a1Q60847 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Col12a1Q60847 Gm18666-201ENSMUST00000190039 958 ntBASIC19.18■□□□□ 0.66
Col12a1Q60847 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.18■□□□□ 0.66
Col12a1Q60847 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col12a1Q60847 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col12a1Q60847 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col12a1Q60847 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.18■□□□□ 0.66
Col12a1Q60847 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col12a1Q60847 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.17■□□□□ 0.66
Col12a1Q60847 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.17■□□□□ 0.66
Col12a1Q60847 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col12a1Q60847 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col12a1Q60847 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col12a1Q60847 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col12a1Q60847 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col12a1Q60847 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col12a1Q60847 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.16■□□□□ 0.66
Col12a1Q60847 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Col12a1Q60847 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col12a1Q60847 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.16■□□□□ 0.66
Col12a1Q60847 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col12a1Q60847 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.15■□□□□ 0.66
Col12a1Q60847 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col12a1Q60847 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col12a1Q60847 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Col12a1Q60847 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.15■□□□□ 0.66
Col12a1Q60847 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col12a1Q60847 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.15■□□□□ 0.66
Col12a1Q60847 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col12a1Q60847 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col12a1Q60847 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col12a1Q60847 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col12a1Q60847 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.15■□□□□ 0.66
Col12a1Q60847 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col12a1Q60847 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.15■□□□□ 0.66
Col12a1Q60847 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Col12a1Q60847 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.14■□□□□ 0.66
Col12a1Q60847 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col12a1Q60847 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.14■□□□□ 0.65
Col12a1Q60847 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms