Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Atp13a4Q5XF90 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atp13a4Q5XF90 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atp13a4Q5XF90 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atp13a4Q5XF90 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Atp13a4Q5XF90 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atp13a4Q5XF90 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.7■□□□□ 0.9
Atp13a4Q5XF90 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Atp13a4Q5XF90 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atp13a4Q5XF90 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atp13a4Q5XF90 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atp13a4Q5XF90 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atp13a4Q5XF90 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atp13a4Q5XF90 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Atp13a4Q5XF90 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atp13a4Q5XF90 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp13a4Q5XF90 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Atp13a4Q5XF90 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp13a4Q5XF90 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp13a4Q5XF90 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp13a4Q5XF90 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp13a4Q5XF90 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atp13a4Q5XF90 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Atp13a4Q5XF90 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp13a4Q5XF90 Gm7860-201ENSMUST00000121190 879 ntBASIC20.64■□□□□ 0.89
Atp13a4Q5XF90 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp13a4Q5XF90 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp13a4Q5XF90 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atp13a4Q5XF90 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atp13a4Q5XF90 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp13a4Q5XF90 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.62■□□□□ 0.89
Atp13a4Q5XF90 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms