Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.61■□□□□ 0.09
Trav8d-1Q5R1H8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-1Q5R1H8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav8d-1Q5R1H8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav8d-1Q5R1H8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav8d-1Q5R1H8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav8d-1Q5R1H8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-1Q5R1H8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Grk6-206ENSMUST00000224995 2971 ntBASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-1Q5R1H8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms