Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Urb1Q571H0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Urb1Q571H0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Urb1Q571H0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Urb1Q571H0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Urb1Q571H0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.58■□□□□ 0.41
Urb1Q571H0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.58■□□□□ 0.41
Urb1Q571H0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Urb1Q571H0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Urb1Q571H0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.58■□□□□ 0.4
Urb1Q571H0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Urb1Q571H0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Urb1Q571H0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Urb1Q571H0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Urb1Q571H0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Urb1Q571H0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Urb1Q571H0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Urb1Q571H0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Urb1Q571H0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Urb1Q571H0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Urb1Q571H0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Urb1Q571H0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Urb1Q571H0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Urb1Q571H0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.56■□□□□ 0.4
Urb1Q571H0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Urb1Q571H0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Urb1Q571H0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Urb1Q571H0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Urb1Q571H0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Urb1Q571H0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Urb1Q571H0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.55■□□□□ 0.4
Urb1Q571H0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.55■□□□□ 0.4
Urb1Q571H0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Urb1Q571H0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Urb1Q571H0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Urb1Q571H0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Urb1Q571H0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Urb1Q571H0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Urb1Q571H0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.54■□□□□ 0.4
Urb1Q571H0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.54■□□□□ 0.4
Urb1Q571H0 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.54■□□□□ 0.4
Urb1Q571H0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Urb1Q571H0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Urb1Q571H0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Urb1Q571H0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Urb1Q571H0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Urb1Q571H0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Urb1Q571H0 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.54■□□□□ 0.4
Urb1Q571H0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Urb1Q571H0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Urb1Q571H0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Urb1Q571H0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Urb1Q571H0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Urb1Q571H0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Urb1Q571H0 Rab3c-203ENSMUST00000224180 967 ntBASIC17.53■□□□□ 0.4
Urb1Q571H0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Urb1Q571H0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Urb1Q571H0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Urb1Q571H0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Urb1Q571H0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.53■□□□□ 0.4
Urb1Q571H0 Dio3-201ENSMUST00000097228 1449 ntBASIC17.53■□□□□ 0.4
Urb1Q571H0 Gm15565-201ENSMUST00000118890 427 ntBASIC17.52■□□□□ 0.4
Urb1Q571H0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.52■□□□□ 0.4
Urb1Q571H0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.52■□□□□ 0.4
Urb1Q571H0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Urb1Q571H0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Urb1Q571H0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Urb1Q571H0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Urb1Q571H0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Urb1Q571H0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Urb1Q571H0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Urb1Q571H0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms