Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Iqck-206ENSMUST00000208658 2891 ntBASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc4Q3TCX3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Khdc4Q3TCX3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Khdc4Q3TCX3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Khdc4Q3TCX3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Khdc4Q3TCX3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Gm10602-201ENSMUST00000098239 609 ntBASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc4Q3TCX3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Reep4-203ENSMUST00000226563 1444 ntBASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc4Q3TCX3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Gm13234-201ENSMUST00000120010 747 ntBASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc4Q3TCX3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc4Q3TCX3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc4Q3TCX3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms