Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.32■□□□□ 0.68
Smad4P97471 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smad4P97471 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad4P97471 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.32■□□□□ 0.68
Smad4P97471 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Smad4P97471 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad4P97471 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smad4P97471 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad4P97471 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad4P97471 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad4P97471 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad4P97471 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.32■□□□□ 0.68
Smad4P97471 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad4P97471 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Smad4P97471 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad4P97471 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smad4P97471 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.31■□□□□ 0.68
Smad4P97471 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.31■□□□□ 0.68
Smad4P97471 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.31■□□□□ 0.68
Smad4P97471 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smad4P97471 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smad4P97471 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smad4P97471 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.3■□□□□ 0.68
Smad4P97471 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.3■□□□□ 0.68
Smad4P97471 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Smad4P97471 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.3■□□□□ 0.68
Smad4P97471 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad4P97471 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smad4P97471 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smad4P97471 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smad4P97471 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.29■□□□□ 0.68
Smad4P97471 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Smad4P97471 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smad4P97471 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Smad4P97471 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smad4P97471 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smad4P97471 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smad4P97471 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smad4P97471 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.28■□□□□ 0.68
Smad4P97471 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smad4P97471 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smad4P97471 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.28■□□□□ 0.68
Smad4P97471 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.28■□□□□ 0.68
Smad4P97471 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.28■□□□□ 0.68
Smad4P97471 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smad4P97471 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smad4P97471 Gm7367-201ENSMUST00000057611 492 ntBASIC19.28■□□□□ 0.68
Smad4P97471 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smad4P97471 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smad4P97471 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smad4P97471 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smad4P97471 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.28■□□□□ 0.68
Smad4P97471 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smad4P97471 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smad4P97471 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smad4P97471 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smad4P97471 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smad4P97471 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smad4P97471 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smad4P97471 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smad4P97471 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smad4P97471 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Smad4P97471 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smad4P97471 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smad4P97471 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smad4P97471 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.26■□□□□ 0.67
Smad4P97471 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Smad4P97471 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.26■□□□□ 0.67
Smad4P97471 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.26■□□□□ 0.67
Smad4P97471 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smad4P97471 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.26■□□□□ 0.67
Smad4P97471 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.25■□□□□ 0.67
Smad4P97471 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smad4P97471 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.25■□□□□ 0.67
Smad4P97471 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smad4P97471 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smad4P97471 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.25■□□□□ 0.67
Smad4P97471 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smad4P97471 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.25■□□□□ 0.67
Smad4P97471 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smad4P97471 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Smad4P97471 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smad4P97471 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smad4P97471 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smad4P97471 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smad4P97471 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smad4P97471 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smad4P97471 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smad4P97471 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smad4P97471 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smad4P97471 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms