Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43cP86449 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43cP86449 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43cP86449 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43cP86449 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.87■□□□□ 0.93
Trim43cP86449 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43cP86449 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43cP86449 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43cP86449 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43cP86449 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43cP86449 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43cP86449 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43cP86449 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43cP86449 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43cP86449 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43cP86449 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43cP86449 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43cP86449 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trim43cP86449 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43cP86449 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43cP86449 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43cP86449 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43cP86449 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43cP86449 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim43cP86449 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43cP86449 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43cP86449 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.85■□□□□ 0.93
Trim43cP86449 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43cP86449 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43cP86449 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43cP86449 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43cP86449 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43cP86449 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.84■□□□□ 0.93
Trim43cP86449 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43cP86449 Gm7860-201ENSMUST00000121190 879 ntBASIC20.84■□□□□ 0.93
Trim43cP86449 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.84■□□□□ 0.93
Trim43cP86449 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43cP86449 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43cP86449 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trim43cP86449 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43cP86449 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43cP86449 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43cP86449 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43cP86449 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43cP86449 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43cP86449 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43cP86449 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.83■□□□□ 0.93
Trim43cP86449 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43cP86449 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.83■□□□□ 0.93
Trim43cP86449 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim43cP86449 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43cP86449 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Trim43cP86449 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.83■□□□□ 0.93
Trim43cP86449 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim43cP86449 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim43cP86449 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim43cP86449 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.82■□□□□ 0.92
Trim43cP86449 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Trim43cP86449 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Trim43cP86449 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43cP86449 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim43cP86449 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim43cP86449 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trim43cP86449 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43cP86449 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43cP86449 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43cP86449 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43cP86449 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim43cP86449 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim43cP86449 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim43cP86449 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43cP86449 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43cP86449 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43cP86449 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43cP86449 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43cP86449 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43cP86449 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43cP86449 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim43cP86449 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43cP86449 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43cP86449 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43cP86449 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43cP86449 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43cP86449 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43cP86449 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Trim43cP86449 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.79■□□□□ 0.92
Trim43cP86449 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43cP86449 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim43cP86449 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim43cP86449 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43cP86449 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms