Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.63■□□□□ 0.41
SgcdP82347 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SgcdP82347 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SgcdP82347 Gm12922-201ENSMUST00000120626 809 ntBASIC17.63■□□□□ 0.41
SgcdP82347 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.63■□□□□ 0.41
SgcdP82347 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.63■□□□□ 0.41
SgcdP82347 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SgcdP82347 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcdP82347 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SgcdP82347 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SgcdP82347 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SgcdP82347 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcdP82347 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SgcdP82347 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SgcdP82347 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.62■□□□□ 0.41
SgcdP82347 Gm10399-202ENSMUST00000202768 748 ntBASIC17.62■□□□□ 0.41
SgcdP82347 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcdP82347 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcdP82347 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcdP82347 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.62■□□□□ 0.41
SgcdP82347 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.62■□□□□ 0.41
SgcdP82347 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.62■□□□□ 0.41
SgcdP82347 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SgcdP82347 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcdP82347 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SgcdP82347 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcdP82347 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcdP82347 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcdP82347 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcdP82347 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SgcdP82347 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcdP82347 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.6■□□□□ 0.41
SgcdP82347 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.6■□□□□ 0.41
SgcdP82347 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SgcdP82347 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.6■□□□□ 0.41
SgcdP82347 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SgcdP82347 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SgcdP82347 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcdP82347 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.59■□□□□ 0.41
SgcdP82347 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SgcdP82347 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SgcdP82347 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcdP82347 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SgcdP82347 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SgcdP82347 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.58■□□□□ 0.41
SgcdP82347 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SgcdP82347 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SgcdP82347 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.58■□□□□ 0.4
SgcdP82347 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SgcdP82347 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SgcdP82347 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.58■□□□□ 0.4
SgcdP82347 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.58■□□□□ 0.4
SgcdP82347 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SgcdP82347 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SgcdP82347 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcdP82347 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SgcdP82347 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SgcdP82347 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SgcdP82347 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SgcdP82347 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcdP82347 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcdP82347 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SgcdP82347 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SgcdP82347 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SgcdP82347 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SgcdP82347 Gm27454-201ENSMUST00000185090 204 ntBASIC17.56■□□□□ 0.4
SgcdP82347 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SgcdP82347 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms