Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad1P70340 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smad1P70340 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad1P70340 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Smad1P70340 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.61■□□□□ 0.73
Smad1P70340 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad1P70340 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.61■□□□□ 0.73
Smad1P70340 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.61■□□□□ 0.73
Smad1P70340 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad1P70340 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad1P70340 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smad1P70340 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad1P70340 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad1P70340 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad1P70340 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.6■□□□□ 0.73
Smad1P70340 Gm26571-201ENSMUST00000181399 666 ntBASIC19.6■□□□□ 0.73
Smad1P70340 Gm42569-201ENSMUST00000200539 472 ntBASIC19.6■□□□□ 0.73
Smad1P70340 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Smad1P70340 Golph3-205ENSMUST00000228671 2842 ntBASIC19.6■□□□□ 0.73
Smad1P70340 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.6■□□□□ 0.73
Smad1P70340 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smad1P70340 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad1P70340 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.59■□□□□ 0.73
Smad1P70340 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Smad1P70340 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.59■□□□□ 0.73
Smad1P70340 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.59■□□□□ 0.73
Smad1P70340 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad1P70340 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.59■□□□□ 0.73
Smad1P70340 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smad1P70340 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smad1P70340 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smad1P70340 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Smad1P70340 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Smad1P70340 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.58■□□□□ 0.72
Smad1P70340 Gm26833-201ENSMUST00000180899 440 ntBASIC19.58■□□□□ 0.72
Smad1P70340 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.58■□□□□ 0.72
Smad1P70340 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad1P70340 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.58■□□□□ 0.72
Smad1P70340 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad1P70340 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad1P70340 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad1P70340 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad1P70340 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad1P70340 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smad1P70340 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad1P70340 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad1P70340 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad1P70340 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad1P70340 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smad1P70340 Gm10849-201ENSMUST00000100397 618 ntBASIC19.57■□□□□ 0.72
Smad1P70340 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad1P70340 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.57■□□□□ 0.72
Smad1P70340 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smad1P70340 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smad1P70340 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad1P70340 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Smad1P70340 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad1P70340 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad1P70340 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad1P70340 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Smad1P70340 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad1P70340 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad1P70340 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Smad1P70340 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.56■□□□□ 0.72
Smad1P70340 Gm43060-201ENSMUST00000200621 289 ntBASIC19.56■□□□□ 0.72
Smad1P70340 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smad1P70340 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.56■□□□□ 0.72
Smad1P70340 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.56■□□□□ 0.72
Smad1P70340 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad1P70340 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Smad1P70340 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.55■□□□□ 0.72
Smad1P70340 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad1P70340 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad1P70340 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smad1P70340 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smad1P70340 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad1P70340 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smad1P70340 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad1P70340 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad1P70340 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad1P70340 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad1P70340 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smad1P70340 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad1P70340 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad1P70340 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Smad1P70340 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.54■□□□□ 0.72
Smad1P70340 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Smad1P70340 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Smad1P70340 Gm42642-201ENSMUST00000200683 355 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms