Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Traf6P70196 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Traf6P70196 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Traf6P70196 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Traf6P70196 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.75■□□□□ 0.59
Traf6P70196 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Traf6P70196 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Traf6P70196 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.75■□□□□ 0.59
Traf6P70196 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Traf6P70196 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Traf6P70196 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Traf6P70196 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.74■□□□□ 0.59
Traf6P70196 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Traf6P70196 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Traf6P70196 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Traf6P70196 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Traf6P70196 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Traf6P70196 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Traf6P70196 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Traf6P70196 Gm12251-201ENSMUST00000117893 792 ntBASIC18.74■□□□□ 0.59
Traf6P70196 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Traf6P70196 Gm21956-201ENSMUST00000179946 522 ntBASIC18.74■□□□□ 0.59
Traf6P70196 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.74■□□□□ 0.59
Traf6P70196 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Traf6P70196 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Traf6P70196 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Traf6P70196 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.73■□□□□ 0.59
Traf6P70196 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Traf6P70196 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Traf6P70196 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Traf6P70196 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Traf6P70196 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.72■□□□□ 0.59
Traf6P70196 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.72■□□□□ 0.59
Traf6P70196 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Traf6P70196 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Traf6P70196 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.71■□□□□ 0.59
Traf6P70196 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.71■□□□□ 0.59
Traf6P70196 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Traf6P70196 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Traf6P70196 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Traf6P70196 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.7■□□□□ 0.58
Traf6P70196 Gm43137-201ENSMUST00000198052 594 ntBASIC18.7■□□□□ 0.58
Traf6P70196 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.7■□□□□ 0.58
Traf6P70196 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Traf6P70196 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Traf6P70196 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Traf6P70196 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Traf6P70196 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.69■□□□□ 0.58
Traf6P70196 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Traf6P70196 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Traf6P70196 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms