Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
Lsm6P62313 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.73■□□□□ 0.27
Lsm6P62313 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.73■□□□□ 0.27
Lsm6P62313 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.73■□□□□ 0.27
Lsm6P62313 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm6P62313 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm6P62313 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lsm6P62313 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm6P62313 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Lsm6P62313 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.72■□□□□ 0.27
Lsm6P62313 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm6P62313 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.72■□□□□ 0.27
Lsm6P62313 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Lsm6P62313 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.72■□□□□ 0.27
Lsm6P62313 Gm43017-201ENSMUST00000198296 752 ntBASIC16.72■□□□□ 0.27
Lsm6P62313 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm6P62313 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm6P62313 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm6P62313 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm6P62313 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.71■□□□□ 0.27
Lsm6P62313 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.71■□□□□ 0.27
Lsm6P62313 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lsm6P62313 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Lsm6P62313 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm6P62313 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Lsm6P62313 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm6P62313 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm6P62313 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm6P62313 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm6P62313 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm6P62313 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lsm6P62313 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lsm6P62313 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm6P62313 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm6P62313 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lsm6P62313 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.7■□□□□ 0.26
Lsm6P62313 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.7■□□□□ 0.26
Lsm6P62313 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm6P62313 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.69■□□□□ 0.26
Lsm6P62313 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.69■□□□□ 0.26
Lsm6P62313 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm6P62313 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.68■□□□□ 0.26
Lsm6P62313 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.68■□□□□ 0.26
Lsm6P62313 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.68■□□□□ 0.26
Lsm6P62313 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Lsm6P62313 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Lsm6P62313 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.68■□□□□ 0.26
Lsm6P62313 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm6P62313 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.67■□□□□ 0.26
Lsm6P62313 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm6P62313 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lsm6P62313 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm6P62313 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm6P62313 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Lsm6P62313 Gm40848-201ENSMUST00000221998 324 ntBASIC16.67■□□□□ 0.26
Lsm6P62313 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm6P62313 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm6P62313 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm6P62313 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms