Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.59□□□□□ -0.23
Cks1bP61025 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cks1bP61025 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Cks1bP61025 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cks1bP61025 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cks1bP61025 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cks1bP61025 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cks1bP61025 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cks1bP61025 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cks1bP61025 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.58□□□□□ -0.24
Cks1bP61025 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cks1bP61025 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.58□□□□□ -0.24
Cks1bP61025 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Cks1bP61025 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cks1bP61025 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.57□□□□□ -0.24
Cks1bP61025 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.57□□□□□ -0.24
Cks1bP61025 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.57□□□□□ -0.24
Cks1bP61025 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cks1bP61025 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.56□□□□□ -0.24
Cks1bP61025 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cks1bP61025 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cks1bP61025 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.56□□□□□ -0.24
Cks1bP61025 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cks1bP61025 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Cks1bP61025 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cks1bP61025 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cks1bP61025 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cks1bP61025 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cks1bP61025 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.55□□□□□ -0.24
Cks1bP61025 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Cks1bP61025 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1bP61025 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.54□□□□□ -0.24
Cks1bP61025 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cks1bP61025 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1bP61025 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms