Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rp1P56716 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1P56716 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1P56716 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1P56716 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1P56716 Gm10812-201ENSMUST00000099864 546 ntBASIC19.71■□□□□ 0.75
Rp1P56716 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Rp1P56716 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rp1P56716 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rp1P56716 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1P56716 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rp1P56716 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.69■□□□□ 0.74
Rp1P56716 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1P56716 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rp1P56716 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1P56716 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1P56716 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1P56716 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1P56716 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.68■□□□□ 0.74
Rp1P56716 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1P56716 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rp1P56716 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.67■□□□□ 0.74
Rp1P56716 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.67■□□□□ 0.74
Rp1P56716 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.67■□□□□ 0.74
Rp1P56716 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1P56716 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1P56716 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.67■□□□□ 0.74
Rp1P56716 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1P56716 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1P56716 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rp1P56716 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Rp1P56716 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1P56716 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rp1P56716 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1P56716 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1P56716 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rp1P56716 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1P56716 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.66■□□□□ 0.74
Rp1P56716 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1P56716 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.66■□□□□ 0.74
Rp1P56716 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.66■□□□□ 0.74
Rp1P56716 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.66■□□□□ 0.74
Rp1P56716 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1P56716 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rp1P56716 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1P56716 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1P56716 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rp1P56716 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.65■□□□□ 0.74
Rp1P56716 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1P56716 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.65■□□□□ 0.74
Rp1P56716 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rp1P56716 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.65■□□□□ 0.74
Rp1P56716 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.65■□□□□ 0.74
Rp1P56716 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rp1P56716 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1P56716 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1P56716 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Rp1P56716 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1P56716 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1P56716 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rp1P56716 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1P56716 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1P56716 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1P56716 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rp1P56716 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rp1P56716 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rp1P56716 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rp1P56716 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
Rp1P56716 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rp1P56716 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1P56716 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1P56716 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.63■□□□□ 0.73
Rp1P56716 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1P56716 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1P56716 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1P56716 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1P56716 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1P56716 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1P56716 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1P56716 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1P56716 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rp1P56716 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1P56716 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1P56716 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rp1P56716 Mir7071-201ENSMUST00000184847 69 ntBASIC19.62■□□□□ 0.73
Rp1P56716 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1P56716 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1P56716 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1P56716 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.61■□□□□ 0.73
Rp1P56716 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.61■□□□□ 0.73
Rp1P56716 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.61■□□□□ 0.73
Rp1P56716 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.61■□□□□ 0.73
Rp1P56716 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1P56716 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.61■□□□□ 0.73
Rp1P56716 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1P56716 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1P56716 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.61■□□□□ 0.73
Rp1P56716 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.61■□□□□ 0.73
Rp1P56716 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1P56716 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms