Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CckbrP56481 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CckbrP56481 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CckbrP56481 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CckbrP56481 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.69■□□□□ 0.42
CckbrP56481 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.68■□□□□ 0.42
CckbrP56481 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.68■□□□□ 0.42
CckbrP56481 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CckbrP56481 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CckbrP56481 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.68■□□□□ 0.42
CckbrP56481 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CckbrP56481 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.67■□□□□ 0.42
CckbrP56481 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CckbrP56481 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.67■□□□□ 0.42
CckbrP56481 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.67■□□□□ 0.42
CckbrP56481 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CckbrP56481 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CckbrP56481 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CckbrP56481 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CckbrP56481 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CckbrP56481 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CckbrP56481 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.66■□□□□ 0.42
CckbrP56481 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CckbrP56481 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CckbrP56481 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CckbrP56481 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.65■□□□□ 0.42
CckbrP56481 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CckbrP56481 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CckbrP56481 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CckbrP56481 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CckbrP56481 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CckbrP56481 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.65■□□□□ 0.42
CckbrP56481 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CckbrP56481 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CckbrP56481 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CckbrP56481 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CckbrP56481 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CckbrP56481 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CckbrP56481 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CckbrP56481 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CckbrP56481 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CckbrP56481 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CckbrP56481 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CckbrP56481 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CckbrP56481 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CckbrP56481 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.63■□□□□ 0.41
CckbrP56481 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CckbrP56481 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.63■□□□□ 0.41
CckbrP56481 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CckbrP56481 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CckbrP56481 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CckbrP56481 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CckbrP56481 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.62■□□□□ 0.41
CckbrP56481 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.62■□□□□ 0.41
CckbrP56481 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CckbrP56481 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.62■□□□□ 0.41
CckbrP56481 Gm10493-201ENSMUST00000097270 612 ntBASIC17.62■□□□□ 0.41
CckbrP56481 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.62■□□□□ 0.41
CckbrP56481 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CckbrP56481 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CckbrP56481 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.62■□□□□ 0.41
CckbrP56481 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.62■□□□□ 0.41
CckbrP56481 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CckbrP56481 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.61■□□□□ 0.41
CckbrP56481 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.61■□□□□ 0.41
CckbrP56481 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CckbrP56481 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CckbrP56481 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CckbrP56481 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CckbrP56481 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms