Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NrlP54846 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
NrlP54846 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NrlP54846 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NrlP54846 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.86
NrlP54846 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NrlP54846 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
NrlP54846 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NrlP54846 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NrlP54846 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NrlP54846 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.39■□□□□ 0.85
NrlP54846 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NrlP54846 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NrlP54846 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NrlP54846 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NrlP54846 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NrlP54846 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NrlP54846 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NrlP54846 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.38■□□□□ 0.85
NrlP54846 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NrlP54846 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NrlP54846 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NrlP54846 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NrlP54846 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.38■□□□□ 0.85
NrlP54846 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NrlP54846 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NrlP54846 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NrlP54846 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NrlP54846 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NrlP54846 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NrlP54846 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
NrlP54846 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NrlP54846 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NrlP54846 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.37■□□□□ 0.85
NrlP54846 AA386476-201ENSMUST00000098781 1665 ntBASIC20.37■□□□□ 0.85
NrlP54846 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NrlP54846 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NrlP54846 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NrlP54846 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NrlP54846 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NrlP54846 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NrlP54846 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Gm8520-201ENSMUST00000186517 868 ntBASIC20.36■□□□□ 0.85
NrlP54846 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.36■□□□□ 0.85
NrlP54846 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NrlP54846 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NrlP54846 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NrlP54846 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.35■□□□□ 0.85
NrlP54846 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NrlP54846 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NrlP54846 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NrlP54846 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NrlP54846 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NrlP54846 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NrlP54846 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NrlP54846 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.35■□□□□ 0.85
NrlP54846 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NrlP54846 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NrlP54846 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NrlP54846 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NrlP54846 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NrlP54846 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NrlP54846 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NrlP54846 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NrlP54846 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
NrlP54846 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.34■□□□□ 0.85
NrlP54846 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NrlP54846 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NrlP54846 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.33■□□□□ 0.85
NrlP54846 Gm6211-202ENSMUST00000167849 925 ntBASIC20.33■□□□□ 0.85
NrlP54846 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
NrlP54846 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NrlP54846 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NrlP54846 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NrlP54846 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NrlP54846 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NrlP54846 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
NrlP54846 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NrlP54846 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NrlP54846 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NrlP54846 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NrlP54846 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NrlP54846 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.32■□□□□ 0.84
NrlP54846 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NrlP54846 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.32■□□□□ 0.84
NrlP54846 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.32■□□□□ 0.84
NrlP54846 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms