Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hnf4aP49698 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hnf4aP49698 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hnf4aP49698 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hnf4aP49698 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hnf4aP49698 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Hnf4aP49698 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hnf4aP49698 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.45■□□□□ 0.54
Hnf4aP49698 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.45■□□□□ 0.54
Hnf4aP49698 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hnf4aP49698 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hnf4aP49698 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hnf4aP49698 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hnf4aP49698 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hnf4aP49698 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Hnf4aP49698 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.44■□□□□ 0.54
Hnf4aP49698 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Hnf4aP49698 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hnf4aP49698 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.43■□□□□ 0.54
Hnf4aP49698 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.43■□□□□ 0.54
Hnf4aP49698 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Hnf4aP49698 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hnf4aP49698 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hnf4aP49698 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hnf4aP49698 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hnf4aP49698 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Hnf4aP49698 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hnf4aP49698 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hnf4aP49698 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hnf4aP49698 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hnf4aP49698 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hnf4aP49698 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hnf4aP49698 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hnf4aP49698 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
Hnf4aP49698 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hnf4aP49698 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Hnf4aP49698 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hnf4aP49698 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hnf4aP49698 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Hnf4aP49698 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.4■□□□□ 0.54
Hnf4aP49698 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hnf4aP49698 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.4■□□□□ 0.54
Hnf4aP49698 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hnf4aP49698 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hnf4aP49698 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Hnf4aP49698 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hnf4aP49698 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.39■□□□□ 0.53
Hnf4aP49698 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hnf4aP49698 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Hnf4aP49698 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.39■□□□□ 0.53
Hnf4aP49698 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hnf4aP49698 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms