Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Xcl1P47993 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC12.56□□□□□ -0.4
Xcl1P47993 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC12.56□□□□□ -0.4
Xcl1P47993 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC12.56□□□□□ -0.4
Xcl1P47993 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Xcl1P47993 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC12.56□□□□□ -0.4
Xcl1P47993 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
Xcl1P47993 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Xcl1P47993 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Xcl1P47993 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Xcl1P47993 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Xcl1P47993 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xcl1P47993 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xcl1P47993 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xcl1P47993 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Xcl1P47993 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Xcl1P47993 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xcl1P47993 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Xcl1P47993 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC12.54□□□□□ -0.4
Xcl1P47993 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Xcl1P47993 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xcl1P47993 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xcl1P47993 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Xcl1P47993 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Xcl1P47993 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.53□□□□□ -0.4
Xcl1P47993 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC12.53□□□□□ -0.4
Xcl1P47993 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Xcl1P47993 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Xcl1P47993 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC12.53□□□□□ -0.4
Xcl1P47993 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Xcl1P47993 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.53□□□□□ -0.4
Xcl1P47993 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Xcl1P47993 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.52□□□□□ -0.4
Xcl1P47993 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.52□□□□□ -0.4
Xcl1P47993 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Xcl1P47993 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Xcl1P47993 Fst-202ENSMUST00000223640 2612 ntBASIC12.52□□□□□ -0.4
Xcl1P47993 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Xcl1P47993 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC12.52□□□□□ -0.41
Xcl1P47993 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.52□□□□□ -0.41
Xcl1P47993 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Xcl1P47993 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Xcl1P47993 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Xcl1P47993 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Xcl1P47993 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.51□□□□□ -0.41
Xcl1P47993 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC12.51□□□□□ -0.41
Xcl1P47993 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Xcl1P47993 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC12.51□□□□□ -0.41
Xcl1P47993 Gm24970-201ENSMUST00000175582 82 ntBASIC12.51□□□□□ -0.41
Xcl1P47993 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC12.51□□□□□ -0.41
Xcl1P47993 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xcl1P47993 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms