Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-2P42586 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nkx2-2P42586 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nkx2-2P42586 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-2P42586 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.55■□□□□ 0.4
Nkx2-2P42586 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.55■□□□□ 0.4
Nkx2-2P42586 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.55■□□□□ 0.4
Nkx2-2P42586 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-2P42586 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-2P42586 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.53■□□□□ 0.4
Nkx2-2P42586 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nkx2-2P42586 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-2P42586 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.52■□□□□ 0.4
Nkx2-2P42586 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-2P42586 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-2P42586 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nkx2-2P42586 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-2P42586 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-2P42586 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-2P42586 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-2P42586 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-2P42586 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Nkx2-2P42586 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-2P42586 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms