Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RxrbP28704 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RxrbP28704 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RxrbP28704 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
RxrbP28704 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.27■□□□□ 0.68
RxrbP28704 Gm43530-201ENSMUST00000195920 274 ntBASIC19.27■□□□□ 0.68
RxrbP28704 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RxrbP28704 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RxrbP28704 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RxrbP28704 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RxrbP28704 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.26■□□□□ 0.67
RxrbP28704 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RxrbP28704 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RxrbP28704 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RxrbP28704 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RxrbP28704 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.25■□□□□ 0.67
RxrbP28704 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RxrbP28704 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.25■□□□□ 0.67
RxrbP28704 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RxrbP28704 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RxrbP28704 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RxrbP28704 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RxrbP28704 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RxrbP28704 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RxrbP28704 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RxrbP28704 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RxrbP28704 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RxrbP28704 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RxrbP28704 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RxrbP28704 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RxrbP28704 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RxrbP28704 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RxrbP28704 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
RxrbP28704 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RxrbP28704 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RxrbP28704 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.23■□□□□ 0.67
RxrbP28704 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RxrbP28704 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.23■□□□□ 0.67
RxrbP28704 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RxrbP28704 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RxrbP28704 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
RxrbP28704 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.23■□□□□ 0.67
RxrbP28704 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RxrbP28704 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RxrbP28704 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RxrbP28704 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RxrbP28704 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RxrbP28704 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RxrbP28704 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.23■□□□□ 0.67
RxrbP28704 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RxrbP28704 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RxrbP28704 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RxrbP28704 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RxrbP28704 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RxrbP28704 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RxrbP28704 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RxrbP28704 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RxrbP28704 Etf1-202ENSMUST00000180351 108 ntBASIC19.21■□□□□ 0.67
RxrbP28704 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.21■□□□□ 0.67
RxrbP28704 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.21■□□□□ 0.67
RxrbP28704 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RxrbP28704 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RxrbP28704 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RxrbP28704 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RxrbP28704 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RxrbP28704 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RxrbP28704 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RxrbP28704 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RxrbP28704 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.21■□□□□ 0.66
RxrbP28704 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RxrbP28704 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RxrbP28704 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.2■□□□□ 0.66
RxrbP28704 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
RxrbP28704 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RxrbP28704 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RxrbP28704 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RxrbP28704 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RxrbP28704 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms