Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gja4P28235 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gja4P28235 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gja4P28235 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gja4P28235 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gja4P28235 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gja4P28235 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gja4P28235 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gja4P28235 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gja4P28235 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Gja4P28235 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gja4P28235 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gja4P28235 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gja4P28235 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gja4P28235 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gja4P28235 Trmt13-210ENSMUST00000198454 880 ntBASIC19.2■□□□□ 0.66
Gja4P28235 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
Gja4P28235 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gja4P28235 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gja4P28235 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gja4P28235 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gja4P28235 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gja4P28235 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gja4P28235 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Gja4P28235 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.19■□□□□ 0.66
Gja4P28235 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Gm10252-201ENSMUST00000209541 832 ntBASIC19.19■□□□□ 0.66
Gja4P28235 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gja4P28235 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gja4P28235 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Gja4P28235 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gja4P28235 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gja4P28235 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gja4P28235 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gja4P28235 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.18■□□□□ 0.66
Gja4P28235 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.18■□□□□ 0.66
Gja4P28235 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gja4P28235 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gja4P28235 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gja4P28235 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.18■□□□□ 0.66
Gja4P28235 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gja4P28235 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Gja4P28235 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gja4P28235 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gja4P28235 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gja4P28235 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.17■□□□□ 0.66
Gja4P28235 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.17■□□□□ 0.66
Gja4P28235 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.17■□□□□ 0.66
Gja4P28235 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.17■□□□□ 0.66
Gja4P28235 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gja4P28235 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gja4P28235 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.17■□□□□ 0.66
Gja4P28235 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.17■□□□□ 0.66
Gja4P28235 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Gja4P28235 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gja4P28235 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Gja4P28235 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gja4P28235 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.16■□□□□ 0.66
Gja4P28235 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.16■□□□□ 0.66
Gja4P28235 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gja4P28235 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gja4P28235 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gja4P28235 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gja4P28235 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.15■□□□□ 0.66
Gja4P28235 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gja4P28235 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gja4P28235 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Gja4P28235 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gja4P28235 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gja4P28235 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gja4P28235 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gja4P28235 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gja4P28235 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.15■□□□□ 0.66
Gja4P28235 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.15■□□□□ 0.66
Gja4P28235 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gja4P28235 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gja4P28235 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Gja4P28235 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gja4P28235 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gja4P28235 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gja4P28235 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Gja4P28235 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Gja4P28235 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gja4P28235 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gja4P28235 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gja4P28235 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Gja4P28235 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gja4P28235 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Gja4P28235 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Gja4P28235 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gja4P28235 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gja4P28235 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms