Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccl6P27784 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl6P27784 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl6P27784 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl6P27784 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccl6P27784 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl6P27784 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl6P27784 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccl6P27784 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl6P27784 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl6P27784 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl6P27784 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl6P27784 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl6P27784 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl6P27784 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl6P27784 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.85□□□□□ -0.03
Ccl6P27784 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl6P27784 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl6P27784 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.85□□□□□ -0.03
Ccl6P27784 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccl6P27784 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.85□□□□□ -0.03
Ccl6P27784 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl6P27784 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Ccl6P27784 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl6P27784 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccl6P27784 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.84□□□□□ -0.03
Ccl6P27784 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccl6P27784 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.84□□□□□ -0.03
Ccl6P27784 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccl6P27784 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccl6P27784 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl6P27784 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccl6P27784 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Ccl6P27784 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl6P27784 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Ccl6P27784 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ccl6P27784 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccl6P27784 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ccl6P27784 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.83□□□□□ -0.04
Ccl6P27784 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Gm6139-201ENSMUST00000079261 882 ntBASIC14.83□□□□□ -0.04
Ccl6P27784 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccl6P27784 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl6P27784 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.82□□□□□ -0.04
Ccl6P27784 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
Ccl6P27784 Gm43173-201ENSMUST00000202246 593 ntBASIC14.82□□□□□ -0.04
Ccl6P27784 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Ccl6P27784 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl6P27784 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
Ccl6P27784 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl6P27784 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl6P27784 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccl6P27784 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.81□□□□□ -0.04
Ccl6P27784 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl6P27784 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ccl6P27784 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl6P27784 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl6P27784 Gm43017-201ENSMUST00000198296 752 ntBASIC14.81□□□□□ -0.04
Ccl6P27784 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl6P27784 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Ccl6P27784 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccl6P27784 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms