Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd40P27512 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd40P27512 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd40P27512 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.33■□□□□ 0.36
Cd40P27512 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cd40P27512 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd40P27512 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cd40P27512 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd40P27512 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd40P27512 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd40P27512 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd40P27512 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd40P27512 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.32■□□□□ 0.36
Cd40P27512 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd40P27512 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd40P27512 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd40P27512 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cd40P27512 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cd40P27512 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd40P27512 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd40P27512 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd40P27512 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.31■□□□□ 0.36
Cd40P27512 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd40P27512 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.31■□□□□ 0.36
Cd40P27512 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.31■□□□□ 0.36
Cd40P27512 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.31■□□□□ 0.36
Cd40P27512 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.31■□□□□ 0.36
Cd40P27512 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.31■□□□□ 0.36
Cd40P27512 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd40P27512 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd40P27512 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Cd40P27512 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd40P27512 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.3■□□□□ 0.36
Cd40P27512 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd40P27512 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd40P27512 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.3■□□□□ 0.36
Cd40P27512 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.3■□□□□ 0.36
Cd40P27512 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cd40P27512 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.3■□□□□ 0.36
Cd40P27512 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.3■□□□□ 0.36
Cd40P27512 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd40P27512 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Cd40P27512 Gm9988-201ENSMUST00000069786 435 ntBASIC17.3■□□□□ 0.36
Cd40P27512 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd40P27512 Gm10493-201ENSMUST00000097270 612 ntBASIC17.3■□□□□ 0.36
Cd40P27512 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Cd40P27512 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cd40P27512 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd40P27512 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd40P27512 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd40P27512 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd40P27512 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd40P27512 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.29■□□□□ 0.36
Cd40P27512 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd40P27512 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd40P27512 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd40P27512 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd40P27512 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd40P27512 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd40P27512 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd40P27512 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.28■□□□□ 0.36
Cd40P27512 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Cd40P27512 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.28■□□□□ 0.36
Cd40P27512 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd40P27512 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd40P27512 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Cd40P27512 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd40P27512 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd40P27512 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.27■□□□□ 0.36
Cd40P27512 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cd40P27512 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cd40P27512 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd40P27512 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd40P27512 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cd40P27512 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd40P27512 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd40P27512 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd40P27512 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd40P27512 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd40P27512 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd40P27512 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd40P27512 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.26■□□□□ 0.35
Cd40P27512 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.26■□□□□ 0.35
Cd40P27512 Gm38205-201ENSMUST00000192243 258 ntBASIC17.26■□□□□ 0.35
Cd40P27512 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.26■□□□□ 0.35
Cd40P27512 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd40P27512 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd40P27512 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.26■□□□□ 0.35
Cd40P27512 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd40P27512 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cd40P27512 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms